Understanding the location and functions of genes within an organism's genome is useful for scientists to learn more about the relationship between organisms. We look at several features of fruit fly genomes as part of the Genomics Education Partnership. We use online software to make judgements about start and stop sites on exons within the genomes. Students can participate remotely, though sessions with the PI are needed for training and initial workthroughs.
A Canvas course with required readings, as well as directions are provided. Initial training is safety training through Penn State. Additionally, methods can be taught over Zoom so that the student can do their part of the experiment at home. Students can vary the amount of time working on the genome, but it is expected to take at least 2 hours a week for training and then another 20 hours for a genome to be annotated. The latter hours can be at the student's discretion post training.
Students must be enrolled at Penn State. Students with a background in DNA mechanics and composition will have an easier time with the project. Students from any major can apply, as long as they have an interest in genomics, but students with less background will need additional background. All techniques will be taught.
Strong internet connection for the software systems to work.
Students should submit what their interest is in the project and what they hope to gain from the experience. This can be included in the email. Students should also explain their background with DNA.
If you are interested in the position, please email the Principal Investigator, Mary Ann Smith, at mvs14@psu.edu